學歷

美國 \ 美國密蘇里大學 \ 電機暨電腦工程所 \ 博士(1992 ~ 1995)

美國 \ 美國密蘇里大學 \ 電機暨電腦工程所 \ 碩士(1990 ~ 1992)

台灣 \ 國立台灣科技大學 \ 電機工程系 \ 學士(1987 ~ 1989)

經歷

國立成功大學醫學院附設醫院 \ 健康數據資源中心 \ 執行長 (2020 ~ now)

美國 \ 系統生物學研究院(ISB) \ 合聘教授 (2012 ~ now)

國立成功大學 \ 資訊工程學系 \ 教授 (1999 ~ now)

國立成功大學 \ 醫學院附設醫院 \ 資訊長 (2019 ~ 2020)

國立成功大學 \ 醫學院附設醫院資訊室 \ 主任 (2019 ~ 2019)

國立成功大學 \ 醫學院老年學研究所 \ 兼任教授 (2017 ~ 2020)

國立成功大學 \ 計算機與網路中心 \ 主任 (2013 ~ 2019)

國立成功大學 \ 圖書館 \ 副館長 (2009 ~ 2013)

工研院 \ 電通所 \ 研究員 (1995 ~ 1996)

專利

類別	專利名稱	國別	專利權人	發明人	專利號碼	專利期間
專利	METHOD OF AN INTERACTIVE HEALTH STATUS ASSESSMENT AND SYSTEM THEREOF	美國	國立成功大學	蔣榮先、楊珮菁	US10978209B2	2021/4/13-2041/04/13
專利	互動式健康狀態評估系統及其方法	中華民國	國立成功大學	蔣榮先、楊珮菁	I659429	2019/5/11-2038/11/29

榮譽及獲獎

獲獎

2022 獲選2021年度科學影響力「全球前 2% 頂尖科學家」

2012-2022 榮獲成功大學特聘教授殊榮

2022 獲選台灣醫療科技展InnoZone的十大亮點之一

2020-2022 第19屆國家新創獎

第18屆國家新創獎精進續獎

第17屆國家新創獎

2020-2021 2021未來科技獎

2020未來科技突破獎

2021 獲聯合國教科文組織(UNESCO)推舉為全球最頂尖的十大AI團隊

2020 獲選「100MVP經理人」

2019 資訊傑出人才獎

2008-2009 美國李氏基金會 傑出學者獎(Li Foundation Fellow)

榮譽

2020迄今 行政院數位國家創新經濟推動小組民間諮詢委員會委員

2019迄今 國家醫療品質獎(NHQA) 評審委員

2016迄今 中華民國大專校院資訊服務協會 理事

2016迄今 ISO 27001 資訊安全管理制度-合格主導稽核員(Lead Auditor)

2017迄今BS 10012 個人資訊管理制度-合格主導稽核員(Lead Auditor)

2010迄今 IEEE 計算智慧學會 「生醫工程與生物資訊技術委員會」

2010-2012為副主席

2012-2014迄今為主席

2007迄今 高等教育評鑑中心 評鑑委員

2007迄今 台灣生物資訊學會 常務理事

2004迄今 Senior Member, IEEE Society

2022-2023 數位發展部資料應用跨域協作與輔導試辦服務輔導專家

2017-2022 第17-22屆 亞太資訊訊科技聯盟大賽(APICTA Awards) 國際評審

2018擔任首席裁判

2017 擔任國家代表裁判並帶領台灣代表隊至孟加拉參加國際競賽

2021 大專院校資訊應用服務創新競賽InnoServe評審委員

2019-2021 台灣醫學資訊學會理事

2017-2021 第22-26屆大專校院資訊應用服務創新競賽 評審

2020 JISE Associate Editors

2018 TCSE 台灣軟體工程研討會 大會主席

2015-2017 TANET臺灣網際網路研討會

2015指導委員/2016籌備委員/2017主編

2016 考試院考選部 特考召集人、典試委員

2011-2013 Asian Association of Societies for Bioinformatics (亞洲生物資訊學會) 理事長

2006-2009 中華民國模糊學會 第六屆理事

2005-2007 中華民國人工智慧學會 第七屆常務理事

著作

Accepted Papers to be Published

專書

1. 蔣榮先 "從A I到智慧醫療" 城邦集團商周出版社 2020年

Refered Papers

 Hsin-Hsiung Chang, Jung-Hsien Chiang, Chi-Shiang Wang, Ping-Fang Chiu, Khaled Abdel-Kader, Huiwen Chen, Edward D Siew, Jonathan Yabes, Raghavan Murugan, Gilles Clermont, Paul M Palevsky, Manisha Jhamb / September 2022 / Predicting Mortality Using Machine Learning Algorithms in Patients Who Require Renal Replacement Therapy in the Critical Care Unit / Journal of Clinical Medicine / 11(18), 5289

 Chi-Shiang Wang, Fang-Yi Su, Jung-Hsien Chiang / July 2022 / MedCheX: An Efficient COVID-19 Detection Model for Clinical Usage / Journal of Information Science & Engineering / 38(4), 749-759

 Pei-Yi Hao, Jung-Hsien Chiang, Yu-De Chen / May 2022 / Possibilistic classification by support vector networks / Neural Networks / 149,40-56

 Ching-Ju Chiu,Lin-Chun Hua,Chieh-Ying Chou,Jung-Hsien Chiang / April 2022 / Robot-enhanced diabetes care for middle-aged and older adults living with diabetes in the community: A small sample size mixed-method evaluation / PLoS ONE / 17(4),e0265384

 Jung-Hsien Chiang, Chung-Yao Ma, Chi-Shiang Wang, Pei-Yi Hao / January 2022 / An Adaptive, Context-Aware, and Stacked Attention Network-Based Recommendation System to Capture Users Temporal Preference / IEEE Transactions on Knowledge and Data Engineering / 1-1

 Sina Abdollahi,Seyedeh Zahra Dehghanian,Liang-Yi Hung,Shiang-Jie Yang,Dao-Peng Chen,L Jeffrey Medeiros, Jung-Hsien Chiang, Kung-Chao Chang / October 2021 / Deciphering genes associated with diffuse large B-cell lymphoma with lymphomatous effusions: A mutational accumulation scoring approach / Biomark research / 9(1),74

 Hui-O Chen,Peng-Chan Lin,Chen-Ruei Liu,Chi-Shiang Wang,Jung-Hsien Chiang / October 2021 / Contextualizing Genes by Using Text-Mined Co-Occurrence Features for Cancer Gene Panel Discovery / Frontiers in Genetic / 12,771435

 Sina Abdollahi,Peng-Chan Lin,Jung-Hsien Chiang / October 2021 / WinBinVec: Cancer-Associated Protein-Protein Interaction Extraction and Identification of 20 Various Cancer Types and Metastasis Using Different Deep Learning Models / IEEE Journal of Biomedical and Health Informatics / 25(10),4052-4063

 Sina Abdollahi, Peng-Chan Lin, Meng-Ru Shen, Jung-Hsien Chiang / July 2021 / Precise uncertain significance prediction using latent space matrix factorization models: genomics variant and heterogeneous clinical data-driven approaches / Briefings in Bioinformatics / 22(4), bbaa281

 Cheng-Yi Kao,Chiao-Yun Lin,Cheng-Chen Chao,Han-Sheng Huang,Hsing-Yu Lee,Chia-Ming Chang,Kang Sung,Ting Rong Chen,Po-Chang Chiang,Li-Ting Huang,Bow Wang,Yi-Sheng Liu,Jung-Hsien Chiang,Chien-Kuo Wang,Yi-Shan Tsai / June 2021 / Automated Radiology Alert System for Pneumothorax Detection on Chest Radiographs Improves Efficiency and Diagnostic Performance / Diagnostics / 2021,11(7),1182

 Chi-Shiang Wang,Bo-Syun Chen,Jung-Hsien Chiang / June 2021/ TDD-BPR: The topic diversity discovering on Bayesian personalized ranking for personalized recommender system / Neurocomputing / 441, 202-213

 Sina Abdollahi, Peng-Chan Lin, Jung-Hsien Chiang / May 2021 / DiaDeL: An accurate deep learning-based model with mutational signatures for predicting metastasis stage and cancer types / IEEE/ACM Transactions on Computational Biology and Bioinformatics / 19(3),1336-1343

 Chi-Shiang Wang, Fang-Yi Su, Tsung-Lu Michael Lee, Yi-Shan Tsai, Jung-Hsien Chiang / May 2021 / CUAB: Convolutional Uncertainty Attention Block Enhanced the Chest X-ray Image Analysis / arXiv preprint arXiv:2105.01840 / https://doi.org/10.48550/arXiv.2105.01840

 Peng-Chan Lin,Hui-O Chen,Chih-Jung Lee,Yu-Min Yeh,Meng-Ru Shen,Jung-Hsien Chiang / January 2021 / Comprehensive assessments of germline deletion structural variants reveal the association between prognostic MUC4 and CEP72 deletions and immune response gene expression in colorectal cancer patients / Human Genomics / 15(1),3

 Ping-Yen Liu,Yi-Shan Tsai,Po-Lin Chen,Huey-Pin Tsai,Ling-Wei Hsu,Chi-Shiang Wang,Nan-Yao Lee,Mu-Shiang Huang,Yun-Chiao Wu,Wen-Chien Ko,Yi-Ching Yang,Jung-Hsien Chiang,Meng-Ru Shen / October 2020 / Application of an Artificial Intelligence Trilogy to Accelerate Processing of Suspected Patients With SARS-CoV-2 at a Smart Quarantine Station: Observational Study / Journal of Medical Internet Research / 22(10):e19878

 Mu-Shiang Huang, Chi-Shiang Wang, Jung-Hsien Chiang, Ping-Yen Liu, Wei-Chuan Tsai / September 2020 / Automated Recognition of Regional Wall Motion Abnormalities Through Deep Neural Network Interpretation of Transthoracic Echocardiography / Originally / 142(16),1510-1520

 Kun-Hsing Yu, Tsung-Lu Michael Lee, Ming-Hsuan Yen, S. C. Kou, Bruce Rosen, Jung-Hsien Chiang, Isaac S. Kohane / August 2020 / Reproducible Machine Learning Methods for Lung Cancer Detection Using Computed Tomography Images / Journal of Medical Internet Research / 22(8),e16709

 D.A. Devyatkin1, A.I. Molodchenkov1, A.V. Lukin1, Y.S. Kim, A.A. Boyko, P.A. Karalkin, J.-H. Chiang, G.D. Volkova, A.Yu. Lupatov / September 2019 / Towards Automated Meta-analysis of Biomedical Texts in the Field of Cell-based Immunotherapy / EXPERIMENTAL RESEARCH / 2,3

 "Kueffner, Robert ; Zach, Neta; Bronfeld, Maya; Norel, Raquel ; Atassi, Nazem ; Balagurusamy, Venkat ; Di Camillo, Barbara ;Chio, Adriano ; Cudkowicz, Merit ; Dillenberger, Donna ;…Chiang, JH (Chiang, Jung-Hsien)[ 27 ] …Stolovitzky, Gustavo…" / January 2019 / Stratification of amyotrophic lateral sclerosis patients: A crowdsourcing approach / Scientific Reports / 9,690

 Chia-Jung Yang, Jung-Hsien Chiang / December 2018 / Cateye: A Hint-Enabled Search Engine Framework for Biomedical Classification Systems / International Computer Symposium / 1013,758-763

 RE Suvorov, Ya S Kim, AM Gisina, JH Chiang, KN Yarygin, A Yu Lupatov / November 2018 / Surface molecular markers of cancer stem cells: computation analysis of full-text scientific articles / Bulletin of Experimental Biology and Medicine / 166(1),135-140

 Chia-Jung Yang, Jung-Hsien Chiang / October 2018 / Gene ontology concept recognition using named concept: understanding the various presentations of the gene functions in biomedical literature / Database: The Journal of Biological Databases and Curation / bay115

 Kun-Hsing Yu, Tsung-Lu Michael Lee, Yu-Ju Chen, Christopher Ré, Samuel C Kou, Jung-Hsien Chiang, Michael Snyder, Isaac S Kohane / August 2018 / A Cloud-Based Metabolite and Chemical Prioritization System for the Biology/Disease-driven Human Proteome Project / Journal of proteome research / 17(12),4345-4357

 Jui-Hung Chang, Chen-En Tsai, Jung-Hsien Chiang / July 2018 / Using Heterogeneous Social Media as Auxiliary Information to Improve Hotel Recommendation Performance / IEEE Access / 6,42647-42660

 Yu Kun-Hsing, Lee Tsung-Lu Michael, Wang Chi-Shiang, Chen Yu-Ju, Re Christopher, Kou Samuel C., Chiang Jung-Hsien*, Kohane Isaac S., Snyder Michael / April 2018 / Systematic Protein Prioritization for Targeted Proteomics Studies through Literature Mining / Journal of proteome research / 17(4),1383-1396

 Hsih-Te Yang, Jiun-Huang Ju, Yue-Ting Wong, Ilya Shmulevich, Jung-Hsien Chiang / May 2017 / Literature-based Discovery of New Candidates for Drug Repurposing / Briefings in bioinformatics / 18(3),488-497

 Kim YS, Kaidina AM, Chiang JH, Yarygin KN, Lupatov AY / January 2017 / Cancer Stem Cell Molecular Markers Verified in vivo / BIOCHEMISTRY MOSCOW-SUPPLEMENT SERIES B-BIOMEDICAL CHEMISTRY / 11(1),43-54

 Hung Shan, Li Min-Shan, Chen Yen-Lin, Chiang Jung-Hsien, Chen Ying-Yeh, Hung Galen Chin-Lun / October 2016 / Smartphone-based ecological momentary assessment for Chinese patients with depression: An exploratory study in Taiwan / ASIAN JOURNAL OF PSYCHIATRY / 23,131–136

 Yang HT, Yang H, Chiang JH, Wang SJ / October 2016 / Translating genomic sequences into antibody efficacy and safety against influenza toward clinical trial outcomes: a case study / DRUG DISCOVERY TODAY / 21(10),1664-1671

 Galen Chin-Lun Hung, Pei-Ching Yang, Chia-Chi Chang, Jung-Hsien Chiang, Ying-Yeh Chen / July 2016 / Predicting Negative Emotions Based on Mobile Phone Usage Patterns: An Exploratory Study / JMIR Research Protocols / 5(3),e160

 YS Kim, AM Kaidina, JH Chiang, KN Yarygin, A Yu Lupatov / March 2016 / Molecular markers of cancer stem cells verified in vivo / Biomeditsinskaya khimiya / 62(3),228-38

 Hung G.Chin-Lun, Li MS, Chen YL, Chiang JH / March 2016 / Capturing Depression with Your Smartphone: Validity and Utilization of iHOPE for Depressed Patients in Taiwan / European Psychiatry / 33,S283

 Wen-Chieh Fang, Huan-Jui Chang, Chen Yang, Hsih-Te Yang, Jung-Hsien Chiang / December 2015 / A boosting approach for predicting slope of ALS / F1000Research / https://doi.org/10.7490/f1000research.1111120.1

 WS Cheng, JH Chiang / January 2015 / Analysis of Prognostic Marker Panel for High-Grade Serous Ovarian Cancer through Age-Dependent DNA Methylation. J Phylogen Evolution Biol. 3: 153 / These results also indicated that our method reliably extracted age-dependent markers with the potential to consider further clinical testing / DOI:10.4172/2329-9002.1000153

 Jung-Hsien Chiang, Jiun-Huang Ju / December 2014 / Discovering Novel Protein-protein Interactions by Measuring the Protein Semantic Similarity from the Biomedical Literature / JOURNAL OF BIOINFORMATICS AND COMPUTATIONAL BIOLOGY / 12(6),SI

 Jung-Hsien Chiang, Pei-Ching Yang, Hsuan Tu / August 2014 / Pattern Analysis in Daily Physical Activity Data for Personal Health Management / Pervasive and mobile computing / 13,13-25

 Yuqing Mao, Kimberly Van Auken, Donghui Li, Cecilia N Arighi, Peter McQuilton, G Thomas Hayman, Susan Tweedie, Mary L Schaeffer, Stanley JF Laulederkind, Shur-Jen Wang, Julien Gobeill, Patrick Ruch, Anh Tuan Luu, Jung-jae Kim, Jung-Hsien Chiang, Yu-De Chen, Chia-Jung Yang, Hongfang Liu, Dongqing Zhu, Yanpeng Li, Hong Yu, Ehsan Emadzadeh, Graciela Gonzalez, Jian-Ming Chen, Hong-Jie Dai, Zhiyong L / August 2014 / Overview of the Gene Ontology Task at BioCreative IV / DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION / 25(2014),bau086

 Jennifer M Holden, Ludek Koreny, Samson Obado, Alexander V Ratushny, Wei-Ming Chen, Jung-Hsien Chiang, Steven Kelly, Brian T Chait, John D Aitchison, Michael P Rout, Mark C Field / May 2014 / Nuclear Pore Complex Evolution: a Trypanosome Mlp Analogue Functions in Chromosomal Segregation but Lacks Transcriptional Barrier Activity / Molecular biology of the cell / 25(9),1421-1436

 Jung-Hsien Chiang, Wan-Shu Cheng, Leroy Hood, and Qiang Tian / May 2014 / An Epigenetic Biomarker Panel for Glioblastoma Multiforme Personalized Medicine through DNA Methylation Analysis of Human Embryonic Stem Cell-like Signature / OMICS: A Journal of Integrative Biology / 18(5),310-323

 Pei-Ching Yang, Chia-Chi Chang, Yen-Lin Chen, Jung-Hsien Chiang, Galen Chin-Lun Hung / April 2014 / Portable assessment of emotional status and support system / International Conference on Health Information Science / 8423,175-183

 Jung-Hsien Chiang , Lin Chan-Hsien / March 2014 / NCS: Incorporating Positioning Data to Quantify Nucleosome Stability in Yeast / Bioinformatics / 30(6),761-767

 Samuel A. Danziger, Alexander V. Ratushny, Jennifer J. Smith, Ramsey A. Saleem, Yakun Wan, Christina E. Arens, Abraham M. Armstrong, Katherine Sitko, Wei-Ming Chen, Jung-Hsien Chiang, David J. Reiss, Nitin S. Baliga, John D. Aitchison / Februery 2014 / Molecular Mechanisms of System Responses to Novel Stimuli are Predictable from Public Data / NUCLEIC ACIDS RESEARCH / 42(3),1442-1460

 Cheng, Wan-Shu, Chiang, Jung-Hsien / December 2013 / CGPredictor: A Systematic Integrated Analytic Tool for Mining and Examining Genome-scale Cancer Independent Prognostic Epigenetic Marker Panels / BMC SYSTEMS BIOLOGY / 7(6),S10

 Wei-Ming Chen, Samuel A Danziger, Jung-Hsien Chiang, John D Aitchison / October 2013 / PhosphoChain: A Novel Algorithm to Predict Kinase and Phosphatase Networks from High-throughput Expression Data / Bioinformatics / 29(19),2435-44

 Tsunglin Liu, Cheng-Hung Tsai, Wen-Bin Lee, Jung-Hsien Chiang / July 2013 / Optimizing Information in Next-Generation-Sequencing (NGS) Reads for Improving De Novo Genome Assembly / PLoS ONE / 8(7),e69503

 Chiang JH, Chang DTH, Kao HY / April 2013 / Introduction to the 23rd International Conference on Genome Informatics (GIW2012) / Gene / 518(1),1-1特刊: SI

 Van de Vosse DW, Wan Y, Lapetina DL, Chen WM, Chiang JH, Aitchison JD, Wozniak RW / February 2013 / A Role for the Nucleoporin Nup170p in Chromatin Structure and Gene Silencing / Cell / 152(5),969-983

 Lee TLM, Chiang JH / November 2012 / A Systems Biology Approach to Solving the Puzzle of Unknown Genomic Gene-Function Association Using Grid-Ready SVM Committee Machines / IEEE COMPUTATIONAL INTELLIGENCE MAGAZINE / 7(4),46-54

 Chang, DTH, Ke, CH, Lin JH, Chiang JH / 2012 / AutoBind: Automatic Extraction of Protein-ligand Binding Affinity Data from Biological Literature / Bioinformatics / 28(16),2162-2168

 Wan Yakuna, Chen Weimingb, Xing Jiec, Tan Jinyina, Li Binga, Chen Huiyinga, Lin Zhanxianb, Chiang Jung-Hsienb, Saleem Ramsey A.d / October 2011 / Erratum: Transcriptome profiling reveals a novel role for trichostatin A in antagonizing histone chaperone Chz1 mediated telomere anti-silencing / FEBS Letters / 585(19),31463

 Lin JW, Chang CH, Lin MW, Ebell, MH, Chiang JH / August 2011 / Automating the Process of Critical Appraisal and Assessing the Strength of Evidence with Information Extraction Technology / Journal of Evaluation in Clinical Practice / 17(4),832-838

 Yakun Wan ,Weiming Chen, Jie Xing, Jinyin Tan, Bing Li, Huiying Chen, Zhanxian Lin, Jung- Hsien Chiang, Saleem Ramsey / August 2011 / Transcriptome Profiling Reveals a Novel Role for Trichostatin A in Antagonizing Histone Chaperone Chz1 Mediated Telomere Anti-silencing / FEBS Letters / 585(15),2519-2525

 Chiang JH,Liu HH, Huang YT / April 2011 / Condensing Biomedical Journal Texts through Paragraph Ranking / BIOINFORMATICS / 27(8),1143-1149

 Chao SY, Chiang JH, Huang AM, Chang WS / March 2011 / An Integrative Approach to Identifying Cancer Chemoresistance-associated Pathways / BMC MEDICAL GENOMICS / 4,23

 Yeh CY, Shin SM, Yeh HH, Wu TJ, Shin JW, Chang TY, Raghavaraju G, Lee CT, Chiang JH, Tseng VS, Lee YCG, Shen CH, Chow NH, Liu HS / April 2011 / Transcriptional Activation of the Axl and PDGFR-alpha by c-Met through a ras- and Src-independent Mechanism in Human Bladder Cancer / BMC Cancer / 11,139

 Yang Pei-Chinga,Chiang Jung-Hsiena,Liu Jen-Chub,Wen Yi-Lunc,Chuang Kuo-Yuc / December 2010 / An efficient cloud for wellness self-management devices and services / Proceedings - 4th International Conference on Genetic and Evolutionary Computing, ICGEC 2010 / 767-770

 Michael T-L Lee, Jimmy J-M Su, Chi-Rong Li, Patrick Y-W Chu, Ming-Sheng Liu, Jung-Hsien Chiang, Kelvin K-C Tsai, Kok-Tong Tan / October 2010 / Gene expression signatures associated with protracted stromal responses to therapeutically relevant cytotoxic stimuli predict breast cancer chemoresponsiveness / Clinical Cancer Research / 16 (19_Supplement),B22

 Chiang JH, Lin JW, Yang CW / May 2010 / Automated Evaluation of Electronic Discharge Notes to Assess Quality of Care for Cardiovascular Diseases Using Medical Language Extraction and Encoding System (MedLEE) / JOURNAL OF THE AMERICAN MEDICAL INFORMATICS ASSOCIATION / 17(3),245-252

 Wan YK, Chiang JH, Lin CH, Arens CE, Saleem RA, Smith JJ , Aitchison JD / March 2010 / Histone Chaperone Chz1p Regulates H2B Ubiquitination and Subtelomeric Anti-silencing / NUCLEIC ACIDS RESEARCH / 38(5),1431-1440

 Cheng LH, Lu W, Kulkarni B, Pejovic T, Yan, XW, Chiang JH, Hood L, Odunsi K, Lin BY / March 2010 / Analysis of chemotherapy response programs in ovarian cancers by the next-generation sequencing technologies / GYNECOLOGIC ONCOLOGY / 117(2)159-169

 Shih-Yi Chao; Jung-Hsien Chiang / October 2009 / Reconstruct feedback control of cell cycle-regulated networks of the yeast by neural network computing / 2006 International Conference on Computing & Informatics / 5276483

 Yung-Chun Chang, Pei-Ching Yang, Jung-Hsien Chiang / September 2009 / Ontology-based intelligent web mining agent for Taiwan travel / 2009 IEEE/WIC/ACM International Joint Conference on Web Intelligence and Intelligent Agent Technology / 3,421-424

 Jung-Hsien Chiang / September 2009 / Tech-ware: Bioinformatics and computational biology resources [Best of the Web] / IEEE Signal Processing Magazine / 26(5),153-158

 Hao PY, Chiang JH, Lin YH / 2009 / A New Maximal-margin Spherical-structured Multi-class Support Vector Machine / APPLIED INTELLIGENCE / 30(2) 98-111

 Wan YK, Saleem RA, Ratushny AV, Roda O, Smith JJ 1, Lin CH, Chiang JH, Aitchison JD / 2009 / Role of the Histone Variant H2A.Z/Htz1p in TBP Recruitment, Chromatin Dynamics, and Regulated Expression of Oleate-Responsive Genes / MOLECULAR AND CELLULAR BIOLOGY / 29(9),2346-2358

 Majetl R, Becker MW, Tian Q, Lee TLM, Yan XW, Liu R, Chiang JH, Hood L, Clarke MF, Weissman IL / March 2009 / Dysregulated Gene Expression Networks in Human Acute Myelogenous Leukemia Stem Cells / PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA / 106(9),3396-3401

 Chiang JH, Ho SH, Wang WH / October 2008 / Similar Genes Discovery System (SGDS): Application for Predicting Possible Pathways by Using GO Semantic Similarity Measure / EXPERT SYSTEMS WITH APPLICATIONS / 35(3),1115-1121

 Chiang JH, Lee TLM / August 2008 / In Silico Prediction of Human Protein Interactions Using Fuzzy-SVM Mixture Models and Its Application to Cancer Research / IEEE TRANSACTIONS ON FUZZY SYSTEMS / 16(4),1087-1095

 Hao PY, Chiang JH / April 2008 / Fuzzy Regression Analysis by Support Vector Learning Approach / IEEE TRANSACTIONS ON FUZZY SYSTEMS / 16(2),428-441

 Chiang JH, Ho SH /

 Chiang JH, Ho SH / March 2008 / A Combination of Rough-based Feature Selection and RBF Neural Network for Classification Using Gene Expression Data / IEEE TRANSACTIONS ON NANOBIOSCIENCE / 7(1),91-99

 Yin ZX, Chiang JH / January 2008 / Novel Algorithm for Coexpression Detection in Time-varying Microarray Data Sets / IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS / 5(1),120-135

 Chiang JH, Yin ZX / November 2007 / Unsupervised Minor Prototype Detection Using an Adaptive Population Partitioning Algorithm / PATTERN RECOGNITION / 40(11),3132-3145

 Chiang JH, Liu HS, Chao SY, Chen CY / November 2007 / Discovering Gene-gene Relations from Sequential Sentence Patterns in Biomedical Literature / EXPERT SYSTEMS WITH APPLICATIONS / 33(4),1036-1041

 Hao PY, Chiang JH, Tu YK / October 2007 / Hierarchically SVM Classification Based on Support Vector Clustering Method and Its Application to Document Categorization / EXPERT SYSTEMS WITH APPLICATIONS / 33(3),627-635

 Hao PY, Chiang JH / March 2007 / A Fuzzy Model of Support Vector Regression Machine / INTERNATIONAL JOURNAL OF FUZZY SYSTEMS / 9(1)45-50

 Chiang JH, Chao SY / March 2007 / Modeling Human Cancer-related Regulatory Modules by GA-RNN Hybrid Algorithms / BMC BIOINFORMATICS / 8,91

 Hao PY, Chiang JH / August 2006 / Pruning and Model-selecting Algorithms in the RBF Frameworks Constructed by Support Vector Learning / INTERNATIONAL JOURNAL OF NEURAL SYSTEMS / 16(4),283-293

 Chiang JH, Shin JW, Liu HH, Chin CL / August 2006 / GeneLibrarian: An Effective Gene-information Summarization and Visualization System / BMC BIOINFORMATICS / 7,392

 Chiang JH, Yu HC / August 2005 / Literature Extraction of Protein Functions Using Sentence Pattern Mining / IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING / 17(8),1088-1098

 Chiang JH, Yue SH, Yin ZX / April 2004 / A New Fuzzy Cover Approach to Clustering / IEEE TRANSACTIONS ON FUZZY SYSTEMS / 12(2),199-208

 Chiang JH, Chen YC / March 2004 / An Intelligent News Recommender Agent for Filtering and Categorizing Large Volumes of Text Corpus / INTERNATIONAL JOURNAL OF INTELLIGENT SYSTEMS / 19(3),201-216

 Chiang JH, Hao PY / February 2004 / Support Vector Learning Mechanism for Fuzzy Rule-based Modeling: A New Approach / IEEE TRANSACTIONS ON FUZZY SYSTEMS / 12(1),1-12

 Chiang JH, Yu HC, Hsu HJ / January 2004 / GIS: A Biomedical Text-mining System for Gene Information Discovery / BIOINFORMATICS / 20(1),120-121

Conference Papers

國際會議

 Pei-Chen Tsai, Tsung-Hua Lee, Kun-Chi Kuo, Fang-Yi Su, Tsung-Lu Michael Lee, Eliana Marostica, Tomotaka Ugai, Melissa Zhao, Mai Chan Lau, Juha P Väyrynen, Marios Giannakis, Yasutoshi Takashima, Seyed Mousavi Kahaki, Kana Wu, Mingyang Song, Jeffrey A Meyerhardt, Andrew T Chan, Jung-Hsien Chiang, Jonathan Nowak, Shuji Ogino, Kun- Hsing Yu/ Apr 2023 / Histopathology images predict multi-omics aberrations and prognoses in colorectal cancer patients / Nature Communications / 14(1),2102

 Cong Phuoc Phan, Jung Hsien Chiang / December 2022 / COVID-19 Deep Clustering: An Ontology constructionclustering method with dynamic medical labeling / The 11th International Symposium on Information and Communication Technology / 4(10),795734

 Yu Wen Fang, Fang-Yi Su, Jung-Hsien Chiang / July 2022 / Position Classifier: Rethinking Position Encoding on Chest X-ray Diseases Identification / Medical Imaging with Deep Learning 2022 Conference Short

 Hsin-Hsiung Chang, Jung-Hsien Chiang, Cheng-Chung Chu / July 2021 / Data-Driven Generation of Medical-Research Hypotheses in Cancer Patients / 2021 IEEE 45th Annual Computers, Software, and Applications Conference (COMPSAC) / 626-631

 Chi-Shiang Wang, Hung-Chun Chne, Jung-Hsien Chiang / November 2019 / Discovering What You Cared by Intelligent Recommender System / 2019 International Conference on Technologies and Applications of Artificial Intelligence (TAAI) / 19279541

 Chi-Shiang Wang, Jung-Hsien Chiang / June 2019 / FuzzAttention on session-based recommender system / 2019 IEEE International Conference on Fuzzy Systems (FUZZ-IEEE) / 2019,8858856

 Wen-Chieh Fang, Meng-Che Hsieh, Pei-Ching Yang, Wen-Gan Li, Ching-Ju Chiu, Jung-Hsien Chiang / December 2015 / iDianNao: an orange technology that recommends volunteer opportunities to older adults / 2015 International Conference on Orange Technologies (ICOT) / 38-41

 Galen Chin-Lun Hung, Pei-Ching Yang, Chen-Yi Wang, Jung-Hsien Chiang / December 2015 / A smartphone-based personalized activity recommender system for patients with depression / Proceedings of the 5th EAI International Conference on Wireless Mobile Communication and Healthcare / 253-257

 Yu-De Chen, Juin-Huang Ju, Ming-Yu Chien, Yu-Cheng Sheng, Tsung-Lu Lee, Jung-Hsien Chiang / September 2015 / CoTri: Extracting chemical-disease relations with co-reference resolution and common trigger words / Proceedings of the Fifth BioCreative Challenge Evaluation Workshop / 286-291

 Wen-Chieh Fang, Pei-Ching Yang, Meng-Che Hsieh, Jung-Hsien Chiang / January 2015 / iDianNao: Recommending Volunteer Opportunities to Older Adults / International Conference on Industrial, Engineering and Other Applications of Applied Intelligent Systems / 9101,683-691

 Jiun-Huang Ju, Yu-De Chen, Jung-Hsien Chiang / April 2012 / DrTW: A Biomedical Term Weighting Method for Document Recommendation / 2012 BioCreative Workshop / 45

 Chao-Hsuan Ke, Tsung-Lu Michael Lee, Jung-Hsien Chiang/ April 2012 / C2HI: a Complete CHemical Information decision system / 2012 BioCreative Workshop / 52

 Heng-Hui Liu, Yi-Ting Huang, Jung-Hsien Chiang / December 2010 / A study on paragraph ranking and recommendation by topic information retrieval from biomedical literature / 2010 International Computer Symposium (ICS2010) / 2010,859-864

 Wei-Ming Chen, I-Lin Wu, Jung-Hsien Chiang, Pei-Yi Hao / July 2010 / Prediction of subcelluar localization using maximal-margin spherical support vector machine / 2010 International Conference on Machine Learning and Cybernetics / 3,1476-1481

 Shih-Yi Chao, Jung-Hsien Chiang / June 2006 / Reconstruct feedback control of cell cycle-regulated networks of the yeast by neural network computing / 2006 International Conference on Computing & Informatics / 10975495

 Chiang JH, Shin JW, Liu HH, Chin CL / April 2006 / Patterns Discovery on Complex Diagnosis and Biological Data Using Fuzzy Latent Variables / 2007 IEEE 23rd International Conference on Data Engineering / 576-585

 Jung-Hsien Chiang, Hsu-Chun Yu / January 2004 / Extracting functional annotations of proteins based on hybrid text mining approaches / Proc BioCreAtIvE Challenge Evaluation Workshop / 10024688058

研究計劃

科技部計劃

科技部 國科會

計畫名稱	起迄日期	補助單位
基於卷積式不確定性注意力模塊之對比式深度學習框架在早期肺癌病癥偵測系統之開發	2021 ~ 2023	科技部
開發一個從普適性標注到具終身學習能力之原創AI工作流程指引	2021 ~ 2023	科技部
互動智慧型機器人改善防疫流程	2020 ~ 2021	科技部
建置一個具多層次學習能力的居家照護機器人之後端推論機制--以銀髮族與糖尿病患者之陪伴與照護實證	2018 ~ 2020	科技部
銀髮族口語互動式居家陪伴及推薦系統	2018 ~ 2020	科技部
建置一個應用深度遞歸神經網絡及語意分析技術於異質性社群網路巨量資料 之智慧型推薦系統	2017 ~ 2018	科技部
以生物資訊技術為基礎之高通量流式細胞術定量分析法找出癌症幹細胞表面生物標記	2015 ~ 2017	科技部
建置典範校園綠能機房及雲端化運算管理之研究	2015 ~ 2017
建立一個新型巨量生醫資料之語意網路查詢分析法及其在藥物重新定位之研究(103-2221-E-006-254-MY2)	2014 ~ 2015	科技部
設計及實作一個創新型銀髮族「友善行動資訊」之社群平台	2014 ~ 2015	科技部
發展一個新穎之次世代定序技術應用於基因功能註解與分析整合平臺	2013 ~ 2014	國科會
勸誘式個人化即時回饋運動處方之研究-勸誘式個人化即時回饋運動處方之研究	2010 ~ 2013	國科會
勸誘式個人化即時回饋運動處方之研究－智慧型知識探勘技術與模糊推論機制於個人化運動處方之建立	2010 ~ 2013	國科會
以自動知識擷取為基礎之計算功能性蛋白質體學	2009 ~ 2012	國科會
實作一個以GO概念模型為計算核心之生物反應路徑預測系統	2008 ~ 2009	國科會
建構一個分析少量候選基因群間關聯模組知識之生物資訊註解平	2006 ~ 2008	國科會
系統化建立基因調控模組網路及其應用在環境毒物基因體資料庫之知識擷取機制實作	2007 ~ 2008	國科會
具意圖分析之醫療資訊QA問答引擎研發與實作	2006 ~ 2007	國科會
建構一個知識探勘生物資訊平台及蛋白質註解加值資料庫	2005 ~ 2006	國科會
建構一個生物資訊分析工具--智慧型基因function註解系統 (2)	2004 ~ 2005	國科會
智慧型數位生活機能支持系統技術研究	2002 ~ 2004
建構一個生物資訊分析工具--智慧型基因function註解系統 (1)	2003 ~ 2004	國科會
以生物資訊方法搜尋砷相關膀胱癌之表現型錄及確認新穎之指標因子 (2)	2004 ~ 2004	國科會
以生物資訊方法搜尋砷相關膀胱癌之表現型錄及確認新穎之指標因子(1)	2002 ~ 2003	國科會
智慧型生物資訊平台架構及其在大量醫學文件中知識擷取之研究	2002 ~ 2003	國科會
智慧型文件探勘技術及其在大量新聞文件中事件擷取之應用	2001 ~ 2002	國科會
智慧型網際網路寬頻社區多媒體資訊伺服系統之研發(3)	2001 ~ 2002	國科會
以網路介面整合式單核甘酸多型性查詢系統及快速發展SNP的生物方法	2000 ~ 2001	國科會
智慧型網際網路寬頻社區多媒體資訊伺服系統之研發(2)	2000 ~ 2001	國科會
資訊採擷支援建築設計協同作業之合作式設計決策研究	2000 ~ 2000	國科會
智慧型網際網路寬頻社區多媒體資訊伺服系統之研發(1)	1999 ~ 2000	國科會
模糊積分器之混合模式探討	1998 ~ 1999	國科會

一般建教案

計畫名稱	起迄日期	補助單位
運用人工智慧技術建構胸腔X光影像偵測疑似癌症病灶模型	2021 ~ 2021	衛生福利部中央健保署
農業統計行銷資訊網	2014 ~ 2014	行政院農業委員會
於行動裝置開發一個焦慮情緒早期偵測系統	2014 ~ 2014	台達電子股份有限公司
建立一個世界級之巨量生醫資料(Big Biodata)合作研究平台	2014 ~ 2014	教育部
教育部南部雲端資料中心建置計畫	2013 ~ 2014	教育部
生物危害物質之公共衛生風險評估與風險管理研究	2005 ~ 2006	衛生署疾管局
全球學術研究網路-網路安全、不當資訊防制及商業機制規劃服務	2002 ~ 2002	國家高速電腦中心
台灣學術網路上不當資訊之智慧型搜尋與過濾機制	2001 ~ 2002	教育部
台灣學術網路上不當資訊之過濾與防制研究	2001 ~ 2002	教育部

指導學生情況

指導學生

博士班:

博五-蔡牧宏、陳惠娥

博四-張信雄

博三-陳良政、吳政達

博二-蔡沛蓁、潘公福

博一-蘇芳毅

碩士班:

碩二-應伶軒、謝至恆、陳俊諺、周郁婕、崔元淇

碩一-曹靖婕、張子泓、劉育瑄、李佳臻、吳嘉欣

指導學生之特殊榮譽

• 2022 碩士生方郁文參加教育部全國大專校院人工智慧競賽，榮獲農業文章文字標註及辨識競賽第一名及創意獎

• 2021 獲聯合國教科文組織(UNESCO)推舉為全球最頂尖的十大AI團隊

• 2021 碩士生黃麗瑾，獲得崇越論文大賞,佳作

• 2020 碩博士生王麒詳、邱煌鑌、吳昭儀參加【國際COVID19科技防疫黑客松】首獎

• 2019 指導專題生應伶軒、周郁婕、林品瑜參加教育部全國大專院校 AI CUP 2019 生醫論文自動分析正式賽榮獲第三名

• 2018 最佳論文獎-楊家融

• 2015 DREAM Challenge - Prostate Cancer競賽，成果卓越獲得第二名，並受邀至美國參加RECOMB/ISCB會議發表成果

• 2015 DREAM ALS Stratification Prize4Life Challenge世界競賽，成果卓越榮獲世界冠軍

• 2015 DREAM Challenge - ALC Stratification Prize4Life世界競賽，成果卓越，並受邀至美國參加RECOMB/ISCB會議發表成果

• 2013 BioCreative IV-Track 4- GO Task, 競賽成果卓越,受邀至美國發表成果並刊於論文集

• 2012 中華電信創新應用大賽-行動應用校園組, 急救指導, 冠軍

• 2012 華義創新軟體競賽-行動應用校園組, I-HOME, 佳作前三名

• 2011 Mobileheros通訊大賽-Android使用者介面設計競賽, 勇闖烏迪島, 企業特別獎

• 2011 中華電信創新應用大賽-行動應用校園組, Let's Point!, 第三名

• 2011 中華電信應用軟體大賽-行動應用遊戲校園組, 食材達人, 佳作

• 2011 中華電信應用軟體大賽-行動應用遊戲校園組, 享瘦大富翁, 佳作

• 2010 中華電信應用軟體大賽-行動應用組校園組, 我願意餵你, 佳作

• 2010 Mobileheros通訊大賽-Android使用者介面設計競賽, O~Sport, 校園菁英獎

• 2008 台灣實證醫學學會會議 最佳論文獎

• 2003 郝沛毅,榮獲2003年龍騰論文獎

• 2001 郝沛毅, 榮獲中華民國第六屆人工智慧與應用研討會(TAAI2001) 最佳論文獎

• 2000 張恆修, 榮獲2000年龍騰論文獎

主辦及參與國際會議

• 2022 GIW2022 XXXI/ISCB-Asia V (International Conference on Genome Informatics) 國際研討會主席

• 2022 MIDL (Medical Imaging with Deep Learning) Conference Short

• 2022 Global Health and Welfare Forum in Taiwan（2022臺灣全球健康福祉論壇）Speaker

• 2022APEC Conference on Digital Healthcare Innovation -- COVID-19 Response by Health Information Utilization(APEC數位健康照護與創新研討會Speaker

• 2021 EuroAsia暨急重症聯合學術年會主講人

• 2018 Data Storage, Management & Analytics User Conference│Accelerate

• 2018 人工智慧 PROJECTANIME 國際研討會

• 2017 微軟世界資料中心高峰研討會

• 2017 第七屆歐盟生醫電子大會

• 2017 MathWorks亞洲研究高峰會

• 2016 Advanced Cloud Technology and Data Center Symposium

• 2012-2014 International Conference on Genome Informatics (GIW)

• 2012 為研討會主辦方

• 2014 The Design Conference for People Who Make Websites

• 2014 The IEEE World Congress on Computational Intelligence (IEEE WCCI)

• 2014 The 18th Pacific-Asia Conference on Knowledge Discovery and Data Mining(PAKDD)

• 2013 IEEE Congress on Evolutionary Computation (IEEE CEC)

• 2013 International Conference on Electrical Engineering and Computer Sciences (EECS)

• 2010 Systems Biology and Bioinformatics Symposium

• 2003 Int’l Conference on Fuzzy Systems, PC member

• 2002 The ninth Bellman Continuum International Workshop on Uncertain Systems and Soft Computing, PC member

• 1999 Int’l Conference on Fuzzy Systems (IFSA'99) Financial Co-chair

• 1998 IEEE Int’l Conference on Tools with Artificial Intelligence, PC member